fastaq-deinterleave

FASTAQ-DEINTERLEAVE(1)           User Commands          FASTAQ-DEINTERLEAVE(1)



NAME
       fastaq_deinterleave - Splits interleaved paired file into two separate
       files

DESCRIPTION
       usage: fastaq_deinterleave [options] <infile> <out_fwd> <out_rev>

       Deinterleaves sequence file, so that reads are written alternately
       between two output files

   positional arguments:
       infile Name of fasta/q file to be deinterleaved

       out_fwd
              Name of output fasta/q file of forwards reads

       out_rev
              Name of output fasta/q file of reverse reads

   optional arguments:
       -h, --help
              show this help message and exit

       --fasta_out
              Use this to write output as fasta (default is same as input)



fastaq 3.17.0                      July 2018            FASTAQ-DEINTERLEAVE(1)