fastaq-make_random_contigs

FASTAQ-MAKE_RANDOM_CONTIGS(1)    User Commands   FASTAQ-MAKE_RANDOM_CONTIGS(1)



NAME
       fastaq_make_random_contigs - Make contigs of random sequence

DESCRIPTION
       usage: fastaq_make_random_contigs [options] <contigs> <length>
       <outfile>

       Makes a multi-FASTA file of random sequences, all of the same length.
       Each base has equal chance of being A,C,G or T

   positional arguments:
       contigs
              Number of contigs to make

       length Length of each contig

       outfile
              Name of output file

   optional arguments:
       -h, --help
              show this help message and exit

       --first_number FIRST_NUMBER
              If numbering the sequences, the first sequence gets this number
              [1]

       --name_by_letters
              Name the contigs A,B,C,... will start at A again if you get to Z

       --prefix PREFIX
              Prefix to add to start of every sequence name

       --seed SEED
              Seed for random number generator. Default is to use python's
              default



fastaq 3.17.0                      July 2018     FASTAQ-MAKE_RANDOM_CONTIGS(1)