fastaq-to_orfs_gff

FASTAQ-TO_ORFS_GFF(1)            User Commands           FASTAQ-TO_ORFS_GFF(1)



NAME
       fastaq_to_orfs_gff - Writes a GFF file of open reading frames

DESCRIPTION
       usage: fastaq_to_orfs_gff [options] <infile> <outfile>

       Writes a GFF file of open reading frames from a sequence file

   positional arguments:
       infile Name of input file

       outfile
              Name of output GFF file

   optional arguments:
       -h, --help
              show this help message and exit

       --min_length INT
              Minimum length of ORF, in nucleotides [300]



fastaq 3.17.0                      July 2018             FASTAQ-TO_ORFS_GFF(1)